The 100 top researcher keywords at UCSF

I was looking to dig into some examples of collaboration patterns in different research areas, when I realized I didn’t even know the basics — what do UCSF researchers actually research?

UCSF Profiles uses PubMed data to extract MeSH keywords for every publication by every UCSF researcher in the system. We can use this to look at the most commonly used MeSH keywords across every researcher’s body of work. There are lots of caveats here (looking at all publications emphasizes past research interests over current ones; we’re not grouping related obscure MeSH terms with more popular ones; MeSH term assignment practices change over time; and this analysis ignores someone’s role as a first, middle, or last author). But this is certainly a start.

Here’s what I found, using the latest UCSF Profiles data:

  1. 98 researchers have HIV Infections in their top 5 MeSH keywords
  2. 53 researchers have Breast Neoplasms in their top 5 MeSH keywords
  3. 42 researchers have Magnetic Resonance Imaging in their top 5 MeSH keywords
  4. 39 researchers have Tomography, X-Ray Computed in their top 5 MeSH keywords
  5. 39 researchers have Brain Neoplasms in their top 5 MeSH keywords
  6. 37 researchers have Internship and Residency in their top 5 MeSH keywords
  7. 37 researchers have HIV-1 in their top 5 MeSH keywords
  8. 34 researchers have Alzheimer Disease in their top 5 MeSH keywords
  9. 33 researchers have Prostatic Neoplasms in their top 5 MeSH keywords
  10. 32 researchers have Saccharomyces cerevisiae in their top 5 MeSH keywords
  11. 31 researchers have Brain in their top 5 MeSH keywords
  12. 31 researchers have Anti-HIV Agents in their top 5 MeSH keywords
  13. 30 researchers have Neoplasms in their top 5 MeSH keywords
  14. 30 researchers have Smoking in their top 5 MeSH keywords
  15. 29 researchers have Diabetes Mellitus, Type 2 in their top 5 MeSH keywords
  16. 29 researchers have Asthma in their top 5 MeSH keywords
  17. 28 researchers have Stroke in their top 5 MeSH keywords
  18. 28 researchers have Sexual Behavior in their top 5 MeSH keywords
  19. 27 researchers have Myocardial Infarction in their top 5 MeSH keywords
  20. 27 researchers have Proteins in their top 5 MeSH keywords
  21. 26 researchers have Neurons in their top 5 MeSH keywords
  22. 26 researchers have Skin Neoplasms in their top 5 MeSH keywords
  23. 26 researchers have Antineoplastic Combined Chemotherapy Protocols in their top 5 MeSH keywords
  24. 25 researchers have Cognition Disorders in their top 5 MeSH keywords
  25. 25 researchers have Homosexuality, Male in their top 5 MeSH keywords
  26. 25 researchers have Emergency Service, Hospital in their top 5 MeSH keywords
  27. 25 researchers have Students, Medical in their top 5 MeSH keywords
  28. 24 researchers have Obesity in their top 5 MeSH keywords
  29. 24 researchers have Glioblastoma in their top 5 MeSH keywords
  30. 23 researchers have Epilepsy in their top 5 MeSH keywords
  31. 23 researchers have Pancreatic Neoplasms in their top 5 MeSH keywords
  32. 23 researchers have Dementia in their top 5 MeSH keywords
  33. 23 researchers have Liver Transplantation in their top 5 MeSH keywords
  34. 23 researchers have Hispanic Americans in their top 5 MeSH keywords
  35. 23 researchers have Education, Medical, Undergraduate in their top 5 MeSH keywords
  36. 22 researchers have Lung in their top 5 MeSH keywords
  37. 22 researchers have Genetic Predisposition to Disease in their top 5 MeSH keywords
  38. 22 researchers have Saccharomyces cerevisiae Proteins in their top 5 MeSH keywords
  39. 22 researchers have Lung Neoplasms in their top 5 MeSH keywords
  40. 22 researchers have Glioma in their top 5 MeSH keywords
  41. 21 researchers have Drosophila in their top 5 MeSH keywords
  42. 21 researchers have Mass Screening in their top 5 MeSH keywords
  43. 21 researchers have Heart Defects, Congenital in their top 5 MeSH keywords
  44. 21 researchers have Anti-Bacterial Agents in their top 5 MeSH keywords
  45. 21 researchers have Liver in their top 5 MeSH keywords
  46. 21 researchers have Polymorphism, Single Nucleotide in their top 5 MeSH keywords
  47. 21 researchers have Physician-Patient Relations in their top 5 MeSH keywords
  48. 21 researchers have Signal Transduction in their top 5 MeSH keywords
  49. 21 researchers have Primary Health Care in their top 5 MeSH keywords
  50. 21 researchers have Nerve Tissue Proteins in their top 5 MeSH keywords
  51. 21 researchers have Stem Cells in their top 5 MeSH keywords
  52. 21 researchers have Drosophila melanogaster in their top 5 MeSH keywords
  53. 20 researchers have Colorectal Neoplasms in their top 5 MeSH keywords
  54. 20 researchers have Stress Disorders, Post-Traumatic in their top 5 MeSH keywords
  55. 20 researchers have Calcium in their top 5 MeSH keywords
  56. 20 researchers have Health Services Accessibility in their top 5 MeSH keywords
  57. 20 researchers have Smoking Cessation in their top 5 MeSH keywords
  58. 20 researchers have Epithelial Cells in their top 5 MeSH keywords
  59. 20 researchers have Wounds and Injuries in their top 5 MeSH keywords
  60. 20 researchers have Drosophila Proteins in their top 5 MeSH keywords
  61. 20 researchers have Models, Molecular in their top 5 MeSH keywords
  62. 19 researchers have Magnetic Resonance Spectroscopy in their top 5 MeSH keywords
  63. 19 researchers have MicroRNAs in their top 5 MeSH keywords
  64. 19 researchers have Respiratory Distress Syndrome, Adult in their top 5 MeSH keywords
  65. 19 researchers have Curriculum in their top 5 MeSH keywords
  66. 19 researchers have Aging in their top 5 MeSH keywords
  67. 19 researchers have Embryonic Stem Cells in their top 5 MeSH keywords
  68. 19 researchers have Caenorhabditis elegans in their top 5 MeSH keywords
  69. 19 researchers have Kidney Transplantation in their top 5 MeSH keywords
  70. 18 researchers have Heart Failure in their top 5 MeSH keywords
  71. 18 researchers have Membrane Proteins in their top 5 MeSH keywords
  72. 18 researchers have Asian Americans in their top 5 MeSH keywords
  73. 18 researchers have DNA in their top 5 MeSH keywords
  74. 18 researchers have Tuberculosis in their top 5 MeSH keywords
  75. 18 researchers have Mental Disorders in their top 5 MeSH keywords
  76. 18 researchers have Transcription Factors in their top 5 MeSH keywords
  77. 18 researchers have Coronary Disease in their top 5 MeSH keywords
  78. 18 researchers have Gene Expression Profiling in their top 5 MeSH keywords
  79. 17 researchers have DNA-Binding Proteins in their top 5 MeSH keywords
  80. 17 researchers have CD8-Positive T-Lymphocytes in their top 5 MeSH keywords
  81. 17 researchers have Skin Diseases in their top 5 MeSH keywords
  82. 17 researchers have Bacterial Proteins in their top 5 MeSH keywords
  83. 17 researchers have Apoptosis in their top 5 MeSH keywords
  84. 17 researchers have Protein-Serine-Threonine Kinases in their top 5 MeSH keywords
  85. 17 researchers have Homeodomain Proteins in their top 5 MeSH keywords
  86. 17 researchers have Hypertension in their top 5 MeSH keywords
  87. 17 researchers have Stress, Psychological in their top 5 MeSH keywords
  88. 17 researchers have T-Lymphocytes in their top 5 MeSH keywords
  89. 17 researchers have Abortion, Induced in their top 5 MeSH keywords
  90. 17 researchers have Schizophrenia in their top 5 MeSH keywords
  91. 17 researchers have Antineoplastic Agents in their top 5 MeSH keywords
  92. 17 researchers have Proteomics in their top 5 MeSH keywords
  93. 17 researchers have Multiple Sclerosis in their top 5 MeSH keywords
  94. 17 researchers have Teaching in their top 5 MeSH keywords
  95. 17 researchers have Acquired Immunodeficiency Syndrome in their top 5 MeSH keywords
  96. 17 researchers have Hepatitis C in their top 5 MeSH keywords
  97. 17 researchers have Laparoscopy in their top 5 MeSH keywords
  98. 16 researchers have Muscle, Skeletal in their top 5 MeSH keywords
  99. 16 researchers have Amyloid beta-Peptides in their top 5 MeSH keywords
  100. 16 researchers have Ovarian Neoplasms in their top 5 MeSH keywords